#NEXUS
[written Fri Mar 20 16:19:14 CET 2015 by Mesquite  version 3.02 (build 681) at vivek-PC/147.94.124.197]

BEGIN TAXA;
	TITLE Taxa;
	DIMENSIONS NTAX=31;
	TAXLABELS
		'OXA-85' 'OXA-211' 'OXA-213' 'OXA-214' 'OXA-229' 'OXA-35' 'OXA-37' 'OXA-47' 'OXA-48' 'OXA-54' 'OXA-55' 'OXA-60' 'OXA-62' 'OXA-198' 'OXA-160' 'OXA-114' 'OXA-133' 'OXA-145' 'OXA-15' 'OXA-20' 'OXA-24' 'OXA-46' 'OXA-58' 'OXA-97' 'OXA-161' 'OXA-22' 'OXA-31' 'OXA-147' 'OXA-163' 'OXA-18' 'OXA-14' 
	;

END;


BEGIN CHARACTERS;
	TITLE  Character_Matrix;
	DIMENSIONS  NCHAR=1;
	FORMAT DATATYPE = CONTINUOUS GAP = - MISSING = ?;
CHARSTATELABELS 
		1 'F_Cefepime' ; 
	MATRIX
	'OXA-85'  0.1
	'OXA-211' 1.0
	'OXA-213' 1.0
	'OXA-214' 1.0
	'OXA-229' 1.0
	'OXA-35'  1.0
	'OXA-37'  1.0
	'OXA-47'  1.0
	'OXA-48'  1.0
	'OXA-54'  1.0
	'OXA-55'  1.0
	'OXA-60'  1.0
	'OXA-62'  1.0
	'OXA-198' 1.953125
	'OXA-160' 1.96875
	'OXA-114' 2.0
	'OXA-133' 2.0
	'OXA-145' 2.0
	'OXA-15'  2.0
	'OXA-20'  2.0
	'OXA-24'  2.0
	'OXA-46'  2.0
	'OXA-58'  2.0
	'OXA-97'  2.0
	'OXA-161' 6.0
	'OXA-22'  8.333333333
	'OXA-31'  8.333333333
	'OXA-147' 16.66666667
	'OXA-163' 16.66666667
	'OXA-18'  16.66666667
	'OXA-14'  32.0

;

END;
BEGIN ASSUMPTIONS;
	TYPESET * UNTITLED   =  Squared:  1;

END;

BEGIN MESQUITECHARMODELS;
	ProbModelSet * UNTITLED   =  Brownian_default:  1;
END;

BEGIN TREES;
	Title Imported_trees;
	LINK Taxa = Taxa;
	TRANSLATE
[0] 		1 'OXA-85',
[1] 		2 'OXA-211',
[2] 		3 'OXA-213',
[3] 		4 'OXA-214',
[4] 		5 'OXA-229',
[5] 		6 'OXA-35',
[6] 		7 'OXA-37',
[7] 		8 'OXA-47',
[8] 		9 'OXA-48',
[9] 		10 'OXA-54',
[10] 		11 'OXA-55',
[11] 		12 'OXA-60',
[12] 		13 'OXA-62',
[13] 		14 'OXA-198',
[14] 		15 'OXA-160',
[15] 		16 'OXA-114',
[16] 		17 'OXA-133',
[17] 		18 'OXA-145',
[18] 		19 'OXA-15',
[19] 		20 'OXA-20',
[20] 		21 'OXA-24',
[21] 		22 'OXA-46',
[22] 		23 'OXA-58',
[23] 		24 'OXA-97',
[24] 		25 'OXA-161',
[25] 		26 'OXA-22',
[26] 		27 'OXA-31',
[27] 		28 'OXA-147',
[28] 		29 'OXA-163',
[29] 		30 'OXA-18',
[30] 		31 'OXA-14';
	TREE Imported_tree_1 = (((((((18,6)0.6300,28)0.9600,31)1.0000,(11,(10,(29,9)0.9900)1.0000)0.9900)0.5500,(13,(14,((7,20)1.0000,(22,(25,19)1.0000)0.9600)1.0000)0.2300)0.1600)0.2800,(1,(12,(((23,24)1.0000,5)0.5000,(2,(17,((21,15)1.0000,(3,4)1.0000)0.4600)0.7700)0.5500)1.0000)0.6000)0.4300)1.0000,((27,8)1.0000,(30,(26,16)0.9600)1.0000)1.0000);

END;


Begin MESQUITE;
		MESQUITESCRIPTVERSION 2;
		TITLE AUTO;
		tell ProjectCoordinator;
		timeSaved 1426864755053;
		getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa;
		tell It;
			setID 0 1103295829141859612;
		endTell;
		getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters;
		tell It;
			setID 0 4372802457040036480;
			mqVersion 302;
			checksumv 0 3 2636150162 null  numChars 1   numItems 1   min 0.1   max 32.0   sumSquares 2087.9228963725695   NumFiles 1 NumMatrices 1;
			mqVersion;
		endTell;
		getWindow;
		tell It;
			suppress;
			setResourcesState false false 194;
			setPopoutState 400;
			setExplanationSize 0;
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			setFont SanSerif;
			setFontSize 10;
			getToolPalette;
			tell It;
			endTell;
			desuppress;
		endTell;
		getEmployee  #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord;
		tell It;
			makeTreeWindow #1103295829141859612  #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker;
			tell It;
				suppressEPCResponse;
				setTreeSource  #mesquite.trees.StoredTrees.StoredTrees;
				tell It;
					setTreeBlock 1;
					toggleUseWeights off;
				endTell;
				setAssignedID 1559.1423215448255.1537875824952528471;
				getTreeWindow;
				tell It;
					setExplanationSize 30;
					setAnnotationSize 20;
					setFontIncAnnot 0;
					setFontIncExp 0;
					setSize 1486 870;
					setLocation -8 0;
					setFont SanSerif;
					setFontSize 10;
					getToolPalette;
					tell It;
					endTell;
					setActive;
					getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator;
				tell It;
					suppress;
					setTreeDrawer  #mesquite.trees.SquareLineTree.SquareLineTree;
					tell It;
						setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard;
						tell It;
							branchLengthsToggle off;
							toggleScale on;
							toggleBroadScale off;
							toggleCenter on;
							toggleEven on;
							setFixedTaxonDistance 0;
						endTell;
						setEdgeWidth 4;
						showEdgeLines off;
						orientRight;
					endTell;
					setBackground White;
					setBranchColor Black;
					showNodeNumbers off;
					showBranchColors on;
					labelBranchLengths off;
					centerBrLenLabels on;
					showBrLensUnspecified on;
					showBrLenLabelsOnTerminals on;
					setBrLenLabelColor 0 0 255;
					setNumBrLenDecimals 6;
					desuppress;
					getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames;
					tell It;
						setColor Black;
						toggleColorPartition off;
						toggleColorAssigned on;
						toggleShadePartition off;
						toggleShowFootnotes on;
						toggleNodeLabels on;
						toggleCenterNodeNames off;
						toggleShowNames on;
						namesAngle ?;
					endTell;
				endTell;
					setTreeNumber 1;
					setDrawingSizeMode 0;
					toggleLegendFloat on;
					scale 0;
					toggleTextOnTree off;
					showWindow;
					newAssistant  #mesquite.ancstates.TraceCharacterHistory.TraceCharacterHistory;
				tell It;
					suspend ;
					setDisplayMode  #mesquite.ancstates.ShadeStatesOnTree.ShadeStatesOnTree;
					tell It;
						toggleLabels off;
						togglePredictions off;
						toggleGray off;
					endTell;
					setHistorySource  #mesquite.ancstates.RecAncestralStates.RecAncestralStates;
					tell It;
						getCharacterSource  #mesquite.charMatrices.CharSrcCoordObed.CharSrcCoordObed;
						tell It;
							setCharacterSource #mesquite.charMatrices.StoredCharacters.StoredCharacters;
							tell It;
								setDataSet #4372802457040036480;
							endTell;
						endTell;
						setMethod  #mesquite.parsimony.ParsAncestralStates.ParsAncestralStates;
						tell It;
							setModelSource  #mesquite.parsimony.CurrentParsModels.CurrentParsModels;
							toggleMPRsMode off;
							getEmployee #mesquite.parsimony.ParsimonySquared.ParsimonySquared;
							tell It;
								toggleWeight on;
							endTell;
						endTell;
						toggleShowSelectedOnly off;
					endTell;
					setCharacter 1;
					setNumBins 3;
					setBins  3.99 9;
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					resume ;
					modifyColors  2 0  55 255 5 2 1  255 248 71 2 2  10 20 255;
				endTell;
				endTell;
				desuppressEPCResponse;
				getEmployee #mesquite.trees.ColorBranches.ColorBranches;
				tell It;
					setColor Red;
					removeColor off;
				endTell;
				getEmployee #mesquite.ornamental.BranchNotes.BranchNotes;
				tell It;
					setAlwaysOn off;
				endTell;
				getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition;
				tell It;
					colorByPartition off;
				endTell;
				getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles;
				tell It;
					setOn on;
					setDigits 4;
					writeAsPercentage off;
					toggleCentred off;
					toggleHorizontal on;
					toggleWhiteEdges on;
					setFontSize 10;
					setOffset 0  0;
				endTell;
				getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings;
				tell It;
					setOn on;
					toggleCentred on;
					toggleHorizontal on;
					setFontSize 10;
					setOffset 0  0;
				endTell;
				getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues;
				tell It;
					panelOpen false;
				endTell;
			endTell;
		endTell;
		endTell;
end;